Final Benchmarks (Part II)
Improvements in RDF, Guessbonds, Distance Based Selections
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Final Benchmarks (Part I)
Benchmarks for automatic selection
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Cell Lists and advantages
Cell-list implementation in MDAnalysis
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Augment Coordinates for Implementation of Periodic Boundary Conditions
Handling Periodic boundary conditions with augmenting particle coordinates
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Optimization of distance evaluations
Inclusion of capped function
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Initial Benchmarks (Continued ..)
Initial comparison with cell-list
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Initial Benchmarks of Distance Calculations
Using Jupyter Notebooks for the first time, and they are awesome!!!
Up and running!
Only if the gas molecule knew, where the Brownian motion is taking it.